jts / sga

de novo sequence assembler using string graphs
http://genome.cshlp.org/content/22/3/549
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Python 2 is end of life on 2020-01-01 #158

Open mr-c opened 4 years ago

mr-c commented 4 years ago

What's the plan for src/bin/{sga-align, sga-astat.py, sga-joinedpe, src/bin/sga-preqc-report.py}?

jts commented 4 years ago

I think sga-preqc-report.py should work with python3. sga-joinedpe is a small unimportant utility program. sga-align should be deprecated. sga-astat should be updated.