sga preprocess disable primer screen

jts / sga

de novo sequence assembler using string graphs

http://genome.cshlp.org/content/22/3/549

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Closed nathanhaigh closed 12 years ago

nathanhaigh commented 12 years ago

I had assumed from the docs that unless I supplied a STRING for -r and/or -c they primer screening would not be enabled.

I'm trying to preprocess some 454 data and it's screening for sequences defined in src/Util/PrimerScreen.cpp. Is there a way to disable this?

jts commented 12 years ago

I added a --no-primer-check option to 56d5c678