This pull add option --kmer-both-strand to "sga filter" to request all the kmers of a read to be observed at least N times on both strands. This option is for example helpful with Illumina reads, where reproducible strand-specific sequencing errors might occur.
jts
commented
10 years ago
This pull add option --kmer-both-strand to "sga filter" to request all the kmers of a read to be observed at least N times on both strands. This option is for example helpful with Illumina reads, where reproducible strand-specific sequencing errors might occur.