'sga correct -a overlap --metrics' reports number of base changes and not base corrections

jts / sga

de novo sequence assembler using string graphs

http://genome.cshlp.org/content/22/3/549

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'sga correct -a overlap --metrics' reports number of base changes and not base corrections #84

Open ktrns opened 9 years ago

ktrns commented 9 years ago

The correction of ONE insertion leads to MANY base changes, because all bases following the insertion are shifted. Reported metrics represent base changes, not base corrections.

Thank you for providing us with sga, Katrin