juaml / hipsnp

handling SNP data, especially from UKB
https://juaml.github.io/hipsnp/
GNU Affero General Public License v3.0
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[BUG] Migrate cat-bgen + prsice for PRS #14

Open fraimondo opened 1 year ago

fraimondo commented 1 year ago

@kaurao found this issue: https://www.biostars.org/p/9490208/

So the idea is to use cat-bgen and then prsice to concatenate al bgen files and then compute the PRS score.

This will require R with prsice