juanbot / CoExpNets

Co-expression network management based on WGCNA + k-means
Apache License 2.0
16 stars 8 forks source link

How to implement minKMEtoStay and minCoreKME #25

Open madzafv opened 2 years ago

madzafv commented 2 years ago

Hi, I would like to use minKMEtoStay=0.3 and minCoreKME=0.5 but I don't know how to do it using CoExpNets. Is it possible to do so? Thank you

juanbot commented 2 years ago

Hi. These methods are from WGCNA of course you can use them if you pass the right values to the right parameters. Would like to help you with that but I did not use these methods myself before.

On Sun, 28 Nov 2021, 23:00 Madza Farias-Virgens, @.***> wrote:

Hi, I would like to use minKMEtoStay=0.3 and minCoreKME=0.5 but I don't know how to do it using CoExpNets. Is it possible to do so? Thank you

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/juanbot/CoExpNets/issues/25, or unsubscribe https://github.com/notifications/unsubscribe-auth/AA2YWNGZGGY3NOLZDA3MWK3UOKQ7RANCNFSM5I5YLPAQ . Triage notifications on the go with GitHub Mobile for iOS https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675 or Android https://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign%3Dnotification-email%26utm_medium%3Demail%26utm_source%3Dgithub.