juancarl0s / lens-proj

0 stars 0 forks source link

Compare FS output w/ lab server #1

Closed juancarl0s closed 2 years ago

juancarl0s commented 2 years ago

Folders my output doesn't have

bem: no files

morph: no files

mpg: no files

rgb: no files

src: no files

tiff: no files

SUMA: has a bunch of files

aparc.a2009s+aseg.nii                          s0_FS_brainmask.auto_Alnd_Exp+orig.HEAD
aparc.a2009s+aseg_rank.nii                     s0_lh.spec
aparc.a2009s+aseg_rank.niml.lt                 s0_MPRAGE+orig.BRIK
aparc.a2009s+aseg_rank.niml.lt.log             s0_MPRAGE+orig.HEAD
aparc.a2009s+aseg_rank.rankmap.1D              s0_MPRAGE_shft.1D
aparc.a2009s+aseg_shft.1D                      s0_rh.spec
aparc+aseg.nii                                 s0_SurfVol_Alnd_Exp.A2E.1D
aparc+aseg_rank.nii                            s0_SurfVol_Alnd_Exp+orig.BRIK
aparc+aseg_rank.niml.lt                        s0_SurfVol_Alnd_Exp+orig.HEAD
aparc+aseg_rank.niml.lt.log                    s0_SurfVol+orig.BRIK
aparc+aseg_rank.rankmap.1D                     s0_SurfVol+orig.HEAD
aparc+aseg_shft.1D                             SessionAtlases.niml
aseg.auto.nii                                  std.141.lh.aparc.a2009s.annot.niml.dset
aseg.auto_shft.1D                              std.141.lh.curv.niml.dset
aseg.nii                                       std.141.lh.inflated.asc
aseg_rank.nii                                  std.141.lh.pial.asc
aseg_rank.niml.lt                              std.141.lh.smoothwm.asc
aseg_rank.niml.lt.log                          std.141.lh.sphere.asc
aseg_rank.rankmap.1D                           std.141.lh.sphere.reg.asc
aseg_shft.1D                                   std.141.lh.sulc.niml.dset
brain.finalsurfs.nii                           std.141.lh.thickness.niml.dset
brain.finalsurfs_shft.1D                       std.141.lh.white.asc
brainmask.auto.nii                             std.141.rh.aparc.a2009s.annot.niml.dset
brainmask.auto_shft.1D                         std.141.rh.curv.niml.dset
brainmask.nii                                  std.141.rh.inflated.asc
brainmask_shft.1D                              std.141.rh.pial.asc
brain.nii                                      std.141.rh.smoothwm.asc
brain_shft.1D                                  std.141.rh.sphere.asc
lh.aparc.a2009s.annot.1D.cmap                  std.141.rh.sphere.reg.asc
lh.aparc.a2009s.annot.1D.roi                   std.141.rh.sulc.niml.dset
lh.aparc.a2009s.annot.niml.dset                std.141.rh.thickness.niml.dset
lh.curv.gii.dset                               std.141.rh.white.asc
lh.inflated.asc                                std.141.s0_both.spec
lh.pial.asc                                    std.141.s0_lh.MI.1D
lh.ribbon.nii                                  std.141.s0_lh.niml.M2M
lh.ribbon_shft.1D                              std.141.s0_lh.spec
lh.smoothwm.asc                                std.141.s0_rh.MI.1D
lh.sphere.asc                                  std.141.s0_rh.niml.M2M
lh.sphere.reg.asc                              std.141.s0_rh.spec
lh.sulc.gii.dset                               std.60.lh.aparc.a2009s.annot.niml.dset
lh.thickness.gii.dset                          std.60.lh.curv.niml.dset
lh.white.asc                                   std.60.lh.inflated.asc
lt_AFN_b3AgYBBvlgEHU5k_DHtXwg.niml.alt         std.60.lh.pial.asc
lt_AFN_mAqvtmggOPHIa8KH3HmRCw.niml.alt         std.60.lh.smoothwm.asc
lt_AFN_WcQwxSii59oSCG2x3lI4vQ.niml.alt         std.60.lh.sphere.asc
norm.nii                                       std.60.lh.sphere.reg.asc
norm_shft.1D                                   std.60.lh.sulc.niml.dset
nu.nii                                         std.60.lh.thickness.niml.dset
nu_noneck.nii                                  std.60.lh.white.asc
nu_noneck_shft.1D                              std.60.rh.aparc.a2009s.annot.niml.dset
nu_shft.1D                                     std.60.rh.curv.niml.dset
rh.aparc.a2009s.annot.1D.cmap                  std.60.rh.inflated.asc
rh.aparc.a2009s.annot.1D.roi                   std.60.rh.pial.asc
rh.aparc.a2009s.annot.niml.dset                std.60.rh.smoothwm.asc
rh.curv.gii.dset                               std.60.rh.sphere.asc
rh.inflated.asc                                std.60.rh.sphere.reg.asc
rh.pial.asc                                    std.60.rh.sulc.niml.dset
rh.ribbon.nii                                  std.60.rh.thickness.niml.dset
rh.ribbon_shft.1D                              std.60.rh.white.asc
rh.smoothwm.asc                                std.60.s0_both.spec
rh.sphere.asc                                  std.60.s0_lh.MI.1D
rh.sphere.reg.asc                              std.60.s0_lh.niml.M2M
rh.sulc.gii.dset                               std.60.s0_lh.spec
rh.thickness.gii.dset                          std.60.s0_rh.MI.1D
rh.white.asc                                   std.60.s0_rh.niml.M2M
s0_both.spec                                   std.60.s0_rh.spec
s0_FS_aparc.a2009s+aseg_Alnd_Exp+orig.BRIK.gz  T1.nii
s0_FS_aparc.a2009s+aseg_Alnd_Exp+orig.HEAD     T1_shft.1D
s0_FS_aparc+aseg_Alnd_Exp+orig.BRIK.gz         wm.asegedit.nii
s0_FS_aparc+aseg_Alnd_Exp+orig.HEAD            wm.asegedit_shft.1D
s0_FS_aseg_Alnd_Exp+orig.BRIK.gz               wm.nii
s0_FS_aseg_Alnd_Exp+orig.HEAD                  wm.seg.nii
s0_FS_aseg.auto_Alnd_Exp+orig.BRIK.gz          wm.seg_shft.1D
s0_FS_aseg.auto_Alnd_Exp+orig.HEAD             wm_shft.1D
s0_FS_brainmask.auto_Alnd_Exp+orig.BRIK.gz
juancarl0s commented 2 years ago

closed, these files can be created with by just running @SUMA_Make_Spec_FS