juexinwang / scGNN

scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks
MIT License
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conda install -c cyz931123 r-scgnnltmg #15

Closed clay001 closed 3 years ago

clay001 commented 4 years ago

which command should I ran if I get ?

PackagesNotFoundError: The following packages are not available from current channels:

juexinwang commented 3 years ago

Hi, Please use coda install -c cyz931123 r-scgnnltmg to install.

We tested in the following enviroment:

(myenv) cyz@Yuzhou:envs$ conda list -n myenv Name Version Build Channel _libgcc_mutex 0.1 main
_r-mutex 1.0.0 anacondar_1
binutils_impl_linux-64 2.33.1 he6710b0_7
binutils_linux-64 2.33.1 h9595d00_15
bwidget 1.9.11 1
bzip2 1.0.8 h7b6447c_0
ca-certificates 2020.10.14 0
cairo 1.14.12 h8948797_3
curl 7.69.1 hbc83047_0
fontconfig 2.13.0 h9420a91_0
freetype 2.10.4 h5ab3b9f_0
fribidi 1.0.10 h7b6447c_0
gcc_impl_linux-64 7.3.0 habb00fd_1
gcc_linux-64 7.3.0 h553295d_15
gfortran_impl_linux-64 7.3.0 hdf63c60_1
gfortran_linux-64 7.3.0 h553295d_15
glib 2.66.1 h92f7085_0
graphite2 1.3.14 h23475e2_0
gsl 2.4 h14c3975_4
gxx_impl_linux-64 7.3.0 hdf63c60_1
gxx_linux-64 7.3.0 h553295d_15
harfbuzz 2.4.0 hca77d97_1
icu 58.2 he6710b0_3
jpeg 9b h024ee3a_2
krb5 1.17.1 h173b8e3_0
ld_impl_linux-64 2.33.1 h53a641e_7
libcurl 7.69.1 h20c2e04_0
libedit 3.1.20191231 h14c3975_1
libffi 3.3 he6710b0_2
libgcc-ng 9.1.0 hdf63c60_0
libgfortran-ng 7.3.0 hdf63c60_0
libpng 1.6.37 hbc83047_0
libssh2 1.9.0 h1ba5d50_1
libstdcxx-ng 9.1.0 hdf63c60_0
libtiff 4.1.0 h2733197_1
libuuid 1.0.3 h1bed415_2
libxcb 1.14 h7b6447c_0
libxml2 2.9.10 hb55368b_3
lz4-c 1.9.2 heb0550a_3
make 4.2.1 h1bed415_1
ncurses 6.2 he6710b0_1
openssl 1.1.1h h7b6447c_0
pango 1.45.3 hd140c19_0
pcre 8.44 he6710b0_0
pixman 0.40.0 h7b6447c_0
r-base 3.6.1 haffb61f_2
r-lattice 0.20_38 r36h96ca727_0
r-matrix 1.2_17 r36h96ca727_0
r-scgnnltmg 0.1.0 r36_0 cyz931123 readline 8.0 h7b6447c_0
tk 8.6.10 hbc83047_0
tktable 2.10 h14c3975_0
xz 5.2.5 h7b6447c_0
zlib 1.2.11 h7b6447c_3
zstd 1.4.5 h9ceee32_0