Fix quality issues - Githubissues

juglab / cryoCARE_pip

PIP package of cryoCARE

BSD 3-Clause "New" or "Revised" License

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Fix quality issues #33

Closed tibuch closed 1 year ago

tibuch commented 1 year ago

I might have found two issues related to the quality drop described in #30.

It looks like the training data was sampled from a much smaller region than the validation data.
I added the rotation augmentation back.

rdrighetto commented 1 year ago

Thanks @tibuch! With some additional tweaks to the code cryoCARE_extract_train_data.py now runs apparently flawless (see https://github.com/juglab/cryoCARE_pip/pull/34). I'm doing a full run right now to check the quality of results, will report back when done.

tibuch commented 1 year ago

Okay, as promised I checked it out and took it for a functional test-run on my side. Now it should work.

@rdrighetto could you restart with the current version? I would be interested to see if the results look now better.

Thanks!