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juglab / napari-n2v

A self-supervised denoising algorithm.
https://juglab.github.io/napari-n2v/
BSD 3-Clause "New" or "Revised" License
24 stars 3 forks source link

Can't import function from module 'bioimageio.core' #60

Open yhfu2307 opened 3 days ago

yhfu2307 commented 3 days ago

I got the error information as 'cannot import name 'resolve_local_source' from 'bioimageio.core.resource_io.utils' (/usr/local/lib/python3.10/dist-packages/bioimageio/core/resource_io/utils.py)'. I wonder which version of bioimageio.core and bioimageio.spec should I use.

jdeschamps commented 2 days ago

Hi,

Which versions bioimage.code do you have installed?

yhfu2307 commented 2 days ago

Hi,

I first used the newest version 0.6.9 and also tried 0.5.3 and 0.4.7. Thanks!

jdeschamps commented 1 day ago

Alright! We will try to have a look early next week, but we are currently stretched thin...

If you are feeling adventurous, we will be retiring the TensorFlow napari plugin and replace it by a similar one that is using our newest library (CAREamics). The installation instructions are not there yet (hopefully updated next week as well; you need to install PyTorch following the website, then napari according to their website, then pip install git+https://github.com/CAREamics/careamics-napari.git), but we will be a lot more reactive there since it is actively developed (and supported): https://github.com/CAREamics/careamics-napari.

It is still an alpha version (e.g. it is missing a prediction plugin for instance), we will officially release it for the I2K conference end of October.

Prediction plugin and BMZ support should be there next week or the one after.