juliencarponcy / trialexp

MIT License
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Figure improvement #51

Closed teristam closed 1 year ago

teristam commented 1 year ago

This PR includes several improvements to the figures generated by the pipeline

  1. Use colours to indicate trial outcome in event histogram. Also plot the 99 percentile of all events in a trial instead of relying on a fixed trial window to give a complete picture of animal behavior. event_histogram_TT002-2023-06-01-153226.

  2. Adjust the color scale of the heatmap automatically to improve readability

  3. Unify the color palette used for various trial_outcome across plots

  4. Introduce a way to only monitor specified folders during the copying of data to the by_session folder to save time