jump-cellpainting / datasets

Images and other data from the JUMP Cell Painting Consortium
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Verify whether a plate in cpg0016/source_7 are rotated #87

Open shntnu opened 7 months ago

shntnu commented 7 months ago

From https://github.com/jump-cellpainting/datasets/issues/77#issuecomment-1691477059

For what concerns source 7, it seems like differences are limited to plate CP1-SC2-25, which is a 384 well plate. I looked a bit better into the plate and I think that the layout in this case is mirrored (e.g. A01 is actually in P23, H12 in I13, etc.), so that's why I couldn't get the expected compounds using the original plate map. I am not sure if this should be considered a problem or not.