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jump-cellpainting
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Images and other data from the JUMP Cell Painting Consortium
BSD 3-Clause "New" or "Revised" License
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Missing labels for some wells in COMPOUND_EMPTY plates in source_1
#75
hanslovsky
opened
1 year ago
2
Fix source_7
#74
shntnu
closed
1 year ago
0
Some JCP labels may be missing in compounds.csv.gz
#73
hanslovsky
closed
1 year ago
5
Source of truth for all images with perturbation labels
#72
hanslovsky
closed
6 months ago
5
Only .parquet files in profiles directory
#71
lewismervin1
opened
1 year ago
6
how to define label in ORF dataset (cpg0016)
#70
liujunhongznn
closed
1 year ago
4
Update README.md
#69
AnneCarpenter
closed
1 year ago
0
Data source in other cell lines
#68
ChenyuWang-Monica
opened
1 year ago
6
Provide instructions for downloading images
#67
shntnu
opened
1 year ago
1
Error in illumination correction filenames for source_11
#66
shntnu
opened
1 year ago
0
Upload arm-centering-corrected CRISPR profiles
#65
shntnu
closed
5 months ago
0
Not able to find cp001 in cp-gallery
#64
MaryFllh
closed
1 year ago
2
Add Repurposing Hub + ChEMBL annotations
#63
shntnu
opened
1 year ago
1
Create FAQ for the resource
#62
shntnu
closed
4 months ago
8
Some wells in load_data are missing (but are present in `wells.csv.gz`)
#61
NinoDui
opened
1 year ago
13
Question regarding the planned profile normalization for cpg0016
#60
dpaysan
closed
1 year ago
2
Prepare for March newsletter
#59
shntnu
closed
1 year ago
1
Some images seem to be missing in the first batches of source 4 (cpg0016).
#58
Arkkienkeli
closed
1 year ago
6
Will published datasets be somehow updated? Thanks!
#57
NinoDui
closed
1 year ago
4
Why is the workspace/metadata folder missing in cpg0016?
#56
tfindley15
opened
1 year ago
2
Add Terra-specific files + use anonymous flag when reading images from S3
#55
deflaux
closed
1 year ago
0
Spring portal
#54
shntnu
closed
1 year ago
0
What is the rows with missing gene names in the ORF dataset?
#53
benkomalo
opened
1 year ago
2
Add source_7
#52
shntnu
closed
1 year ago
0
Update ORF metadata
#51
shntnu
closed
1 year ago
0
Add source_7
#50
shntnu
closed
1 year ago
1
How does one identify replicates?
#49
williamdee1
opened
1 year ago
4
Set type as dataset, add preprints to date
#48
bethac07
closed
1 year ago
0
Create .zenodo.json to fix author list
#47
shntnu
closed
1 year ago
0
Add citation file, and maybe Zenodo json file
#46
bethac07
opened
1 year ago
1
Update README.md with DOI
#45
shntnu
closed
1 year ago
5
How does one load pilot data sets?
#44
asfandyarazhar13
opened
1 year ago
6
Stats on number and size of images files
#43
shntnu
closed
7 months ago
0
Cleanup
#42
shntnu
closed
1 year ago
0
Report statistics
#41
shntnu
closed
1 year ago
0
Question regarding the illumination correction
#40
dpaysan
closed
1 year ago
3
Add CRISPR dataset
#39
shntnu
closed
1 year ago
1
Are all compounds/genes from cpg0000 replicated in cpg0016?
#38
nmra-abarthmaron
closed
1 year ago
2
Drop BORTEZOMIB plate type
#37
shntnu
closed
1 year ago
0
Update metadata: Remove bortezomib
#36
shntnu
closed
1 year ago
1
cpg0016, source 7, sqlite files are of size 0
#35
Arkkienkeli
closed
1 year ago
3
cpg0016, source 6, sqlite file for one of the plates is of size 0
#34
Arkkienkeli
closed
1 year ago
3
cpg0012 - error in load_data.csv
#33
tfindley15
closed
1 year ago
5
Fix source_10 NA
#32
bethac07
closed
1 year ago
0
Add more metadata files
#31
bethac07
closed
7 months ago
5
Add source_9
#30
shntnu
closed
1 year ago
4
Add source_1
#29
shntnu
closed
1 year ago
2
Adding source_2 and source_11
#27
shntnu
closed
1 year ago
1
Metadata_pert_type is now negcon/poscon/trt and eGFP is poscon
#26
shntnu
closed
1 year ago
0
Add microscope and filter configs
#25
alxndrkalinin
closed
1 year ago
0
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