Closed maxybck closed 3 years ago
Hi,
It seems Perl cannot get the absolute path of your file test.txt, maybe you can try to input it manually.
No that is not the issue:
Could you print the head of your test.txt file?
You can try to input a single .fa/.fastq file first to test the script.
hello, you got me it was user error. I left the /home out of the absolute path. If you don't mind, can you confirm the format of the input files, do they need to be unzipped fastq files?
Yes, the compressed files need to be unpacked.
also it needs to be called
Yes, suffix with .fastq/.fq is needed in your case.
whenever I run the perl script sports.pl I get the same issue. What is going on?