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junchaoshi / sports1.1

Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs
GNU General Public License v3.0
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CCA end annotation #14

Closed xiaoyunguo closed 3 years ago

xiaoyunguo commented 3 years ago

Hi, Thank you so much for answering my previous questions promptly. I have another question about the CCA end annotation: does it only count reads with intact non-template CCA tails or count those with non-template C or CC tails as well? I couldn't tell from my result because I see only intact CCA tails. Thank you very much!

junchaoshi commented 3 years ago

Only those tsRNAs with the entire CCA end will be annotated as tsRNA-CCA-end.