Closed dktanwar closed 3 years ago
Hi,
For rRNAs, One sequence for each kind of rRNAs is manually/arbitrually selected.
For mito-tRNAs, the sequences of Mus Musculus are subspecies are also included, such as Mus musculus castaneus, Mus musculus molossinus, and Mus musculus musculus, while the duplicate seqs are removed.
Best, Junchao
Hi,
I am trying to understand how the pre-compiled databases were obtained.
I am not sure how exactly rRNAs were obtained. Does one just have to search for the species and take all the fasta sequences?
It looks like there are only 22 mt_tRNAs for mouse: http://mttrna.bioinf.uni-leipzig.de/mtDataOutput/Result
Whereas, there are 45 in the pre-compiled ones.
Thank you for clarifying.