Closed BIGRICEgo closed 11 months ago
Hi Arya,
The 7 mt-tRNA variants in the reference file are collected from the subspecies to maximize the mapping rate. You may remove the last 7 sequences in the mt-tRNA reference file if you would like to. And Yes, the updated precompiled database is on the schedule list.
My very best, Junchao
Hi Junchao,
I have only one small question regarding the Human precompiled database you provided. I noticed that the file hg19-mt_tRNAs.fa contains 29 sequences, but when I searched mitotRNAdb, I only found 22 results. Could you please explain why there is a discrepancy? Additionally, I'm just wondering whether you have plans to provide a precompiled database for hg38 in the future?
Thank you for your help and expertise.
Best regards, Arya