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junqiangchen / LungLobeSegmentation

Lobe Segmentation
https://cirrus.grand-challenge.org/LobeSegmentation/
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Can't Detect Raw Files #4

Closed anirban1513 closed 3 years ago

anirban1513 commented 3 years ago

Hello!!

I have downloaded the images from LUNA6 Dataset and put them(Both mhd's & Raw's into same folder) . When I run 3D Prepare, SimpleITK Can't detect the Raw Files. It shows this error:

RuntimeError: Exception thrown in SimpleITK ReadImage: /tmp/SimpleITK/Code/IO/src/sitkImageReaderBase.cxx:107: sitk::ERROR: Unable to determine ImageIO reader for "/data/lobedata/LUNG_LOBE_CT_Data/Train/Image/1.3.6.1.4.1.14519.5.2.1.6279.6001.307835307280028057486413359377.raw"

What should I do??

I am running in AWS EC2, Ubuntu 18.04 V100 GPU.

anirban1513 commented 3 years ago

Matter Solved. Ohe has to keep both mhd and raw file in the same location.