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junseonghwan / PhylEx

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Accept gexpr matrix as an (optional) input #23

Open junseonghwan opened 3 years ago

junseonghwan commented 3 years ago

Main PhylEx program should accept (optional) gexpr matrix to perform CN inference.

junseonghwan commented 3 years ago

The first line contains the header: gene name, chr, start, end, cell name 0, ..., cell name C.

The cell names must match the name provided in the single cell file for PhylEx inference.

We will assume that the input data is sorted based on chromosome and start positions.