Add almost-infinite scenario with Clark2Dt dispersal

[juntyr]

• [x] Implement Clark 2Dt dispersal kernel
  • [x] Standard dispersal
  • [x] Dispersal to a different location
  • [x] implemented with rejection sampling
  • [x] Dispersal to a different location probability
  • [x] implemented with numerical integration
  • [x] Does normal dispersal need a correction?
  • [x] Does noise-filtered normal dispersal need a correction?
  • [x] Enable circle origin sampling with arbitrary centres
  • [x] Enable both circle and rectangle origin sampling for both almost-infinite scenario variants
• [x] Fix CI failures from CUDA install
• [x] Squash commits and add @NicoFirbas as a co-author

[codecov-commenter]

Codecov Report

Attention: Patch coverage is 37.06294% with 450 lines in your changes are missing coverage. Please review.

Project coverage is 16.35%. Comparing base (8c6e722) to head (e95edaa). Report is 12 commits behind head on main.

Files	Patch %	Lines
...cogs/dispersal_sampler/almost_infinite_clark2dt.rs	46.11%	222 Missing :warning:
rustcoalescence/src/args/config/scenario.rs	0.00%	45 Missing :warning:
necsim/impls/cuda/src/cogs/maths.rs	0.00%	33 Missing :warning:
...cogs/dispersal_sampler/in_memory/cumulative/mod.rs	0.00%	27 Missing :warning:
...std/src/cogs/origin_sampler/singleton_demes/mod.rs	0.00%	25 Missing :warning:
.../src/cogs/origin_sampler/singleton_demes/circle.rs	0.00%	24 Missing :warning:
.../src/cogs/dispersal_sampler/in_memory/alias/mod.rs	0.00%	9 Missing :warning:
...gs/dispersal_sampler/in_memory/packed_alias/mod.rs	0.00%	9 Missing :warning:
...dispersal_sampler/in_memory/separable_alias/mod.rs	0.00%	9 Missing :warning:
...ispersal_sampler/in_memory/cumulative/dispersal.rs	0.00%	5 Missing :warning:
... and 14 more

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Additional details and impacted files

```diff @@ Coverage Diff @@ ## main #273 +/- ## ========================================== + Coverage 15.19% 16.35% +1.16% ========================================== Files 315 297 -18 Lines 21401 21116 -285 ========================================== + Hits 3251 3453 +202 + Misses 18150 17663 -487 ```

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[juntyr]

@NicoFirbas I've now added support for p != 1 and the scenario config now takes a tail_p parameter

[juntyr]

@NicoFirbas

Can we add a note stating that the 2Dt tends to Gaussian as p becomes large and tends to Cauchy as p goes to zero? Also could be have the default value for the p parameter be 1?

Done :)

[juntyr]

@NicoFirbas I've now started merging the Clark2Dt scenario into the AlmostInfinite scenario (though it is not quite done yet - only rectangle sampling areas are supported thus far). You now need to enable the almost-infinite-clark2dt-dispersal-scenario and use the following scenario config:

scenario: AlmostInfinite(
    sample: Rectangle(x: 0, y: 0, width: 10000, height: 10000),
    dispersal: Clark2Dt(shape_u: 150, tail_p: 1.0),
)

[juntyr]

@NicoFirbas The config format has slightly changed again as I've done a final pass over the code changes - it's now:

scenario: AlmostInfinite(
    sample: Rectangle(origin: (x: 0, y: 0), width: 10000, height: 10000),
    dispersal: Clark2Dt(shape_u: 150, tail_p: 1.0),
)

[juntyr]

@NicoFirbas I tried to add you as a co-author of this PR but it seems I used the wrong email address - could you share one that is linked to your GitHub account so that I can fix the commit authorship?

[NicoFirbas]

Hi Juniper. That is strange. To my knowledge the email I have linked to my github account is this one @.***). It is where I am receiving all of my email notifications as well. Nicolás Firbas https://www.researchgate.net/profile/Nicolas_Firbas

On Sat, Mar 2, 2024 at 11:28 AM Juniper Tyree @.***> wrote:

@NicoFirbas https://github.com/NicoFirbas I tried to add you as a co-author of this PR but it seems I used the wrong email address - could you share one that is linked to your GitHub account so that I can fix the commit authorship?

— Reply to this email directly, view it on GitHub https://github.com/juntyr/necsim-rust/pull/273#issuecomment-1974757695, or unsubscribe https://github.com/notifications/unsubscribe-auth/ATJMXQFBJ6JAMZF5GXJNKYDYWGSWLAVCNFSM6AAAAABDP55LB2VHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMYTSNZUG42TONRZGU . You are receiving this because you were mentioned.Message ID: @.***>