jupyter cms quick-setup --sys-prefix not working

[jmontoyam]

Hi, first of all, please excuse me if this is a silly question.

I have successfully installed the content manager package: pip install jupyter_cms Collecting jupyter_cms Requirement already satisfied (use --upgrade to upgrade): whoosh<3.0,>=2.7.0 in ./anaconda/envs/mne_env_py2/lib/python2.7/site-packages (from jupyter_cms) Requirement already satisfied (use --upgrade to upgrade): scandir<2.0,>=1.1 in ./anaconda/envs/mne_env_py2/lib/python2.7/site-packages (from jupyter_cms) Requirement already satisfied (use --upgrade to upgrade): notebook<5.0,>=4.0.0 in ./anaconda/envs/mne_env_py2/lib/python2.7/site-packages (from jupyter_cms) Requirement already satisfied (use --upgrade to upgrade): ipython>=4.1.0 in ./anaconda/envs/mne_env_py2/lib/python2.7/site-packages (from jupyter_cms) Installing collected packages: jupyter-cms Successfully installed jupyter-cms-0.6.1

But when I try to activate it I get the following error:

jupyter cms quick-setup --sys-prefix Traceback (most recent call last): File "/home/user/anaconda/envs/mne_env_py2/bin/jupyter-cms", line 11, in sys.exit(main()) File "/home/user/anaconda/envs/mne_env_py2/lib/python2.7/site-packages/jupyter_cms/extensionapp.py", line 300, in main ExtensionApp.launch_instance() File "/home/user/anaconda/envs/mne_env_py2/lib/python2.7/site-packages/traitlets/config/application.py", line 658, in launch_instance app.start() File "/home/user/anaconda/envs/mne_env_py2/lib/python2.7/site-packages/jupyter_cms/extensionapp.py", line 297, in start super(ExtensionApp, self).start() File "/home/user/anaconda/envs/mne_env_py2/lib/python2.7/site-packages/traitlets/config/application.py", line 305, in start return self.subapp.start() File "/home/user/anaconda/envs/mne_env_py2/lib/python2.7/site-packages/jupyter_cms/extensionapp.py", line 202, in start from notebook import serverextensions ImportError: cannot import name serverextensions

I'm running jupyter notebook 4.2.1

I would really appreciate any help you could give me.

P.S: I have installed and activated jupyter-dashboards, and it's working fine.

[parente]

Can you post the output of conda list with your mne_env_py2 environment is active?

[jmontoyam]

Thank you very much for your quick answer.

Here it is the output of conda list when my mne_env_py2 is active:

packages in environment at /home/user/anaconda/envs/mne_env_py2:

# accelerate 1.10.0 np19py27_p0
alabaster 0.7.6 py27_0
appdirs 1.4.0 apptools 4.2.1 py27_0
babel 2.1.1 py27_0
backports 1.0 py27_0
backports_abc 0.4 py27_0
bokeh 0.12.3 py27_0
cairo 1.12.18 6
certifi 14.05.14 py27_0
configobj 5.0.6 py27_0
coverage 3.7.1 py27_0
cudatoolkit 6.0 p0
cycler 0.9.0 py27_0
dbus 1.10.10 0
decorator 4.0.9 py27_0
decorator 3.4.2 docutils 0.12 py27_0
enum34 1.0.4 py27_0
envisage 4.4.0 py27_1
expat 2.1.0 0
flask 0.10.1 py27_1
fontconfig 2.11.1 6
freetype 2.5.5 0
funcsigs 0.4 py27_0
futures 3.0.3 py27_0
get_terminal_size 1.0.0 py27_0
glib 2.43.0 1
gst-plugins-base 1.8.0 0
gstreamer 1.8.0 0
h5py 2.4.0 np19py27_0
hdf5 1.8.14 0
icu 54.1 0
ipykernel 4.1.1 py27_0
ipython 5.1.0 py27_0
ipython-notebook 4.0.4 py27_0
ipython-qtconsole 4.0.1 py27_0
ipython_genutils 0.1.0 py27_0
ipywidgets 4.1.0 py27_0
itsdangerous 0.24 py27_0
jedi 0.9.0 py27_0
jinja2 2.8 py27_0
joblib 0.9.4 py27_0
jpeg 8d 0
jsonschema 2.4.0 py27_0
jupyter 1.0.0 py27_3
jupyter-cms 0.6.1 jupyter-dashboards 0.6.1 jupyter_client 4.4.0 py27_0
jupyter_console 5.0.0 py27_0
jupyter_core 4.2.0 py27_0
lcms 1.19 0
libffi 3.2.1 0
libgcc 5.2.0 0
libgfortran 3.0.0 1
libpng 1.6.22 0
libsodium 1.0.3 0
libtiff 4.0.2 1
libxcb 1.12 0
libxml2 2.9.2 0
line-profiler 1.0 llvmlite 0.5.0 py27_0
markupsafe 0.23 py27_0
matplotlib 1.5.3 np111py27_0
mayavi 4.4.0 np19py27_0
mistune 0.7.1 py27_0
mkl 11.3.3 0
mkl-rt 11.1 p0
mkl-service 1.0.0 py27_p1
mklfft 2.0 np19py27_p0
nbconvert 4.0.0 py27_0
nbformat 4.0.1 py27_0
nibabel 2.0.0 nitime 0.5 nose 1.3.7 py27_0
notebook 4.0.6 py27_0
numba 0.19.1 np19py27_0
numbapro 0.17.1 np19py27_p0
numbapro_cudalib 0.2 0
numexpr 2.6.0 np111py27_0
numpy 1.11.2 py27_0
openssl 1.0.2g 0
pandas 0.19.0 np111py27_0
path.py 8.1.2 py27_1
pathlib2 2.1.0 py27_0
patsy 0.4.1 py27_0
pep8 1.6.2 py27_0
pexpect 3.3 py27_0
pickleshare 0.5 py27_0
pil 1.1.7 py27_1
pillow 2.8.1 py27_1
pip 8.1.2 py27_0
pixman 0.32.6 0
prompt_toolkit 1.0.3 py27_0
psutil 3.2.2 py27_0
ptyprocess 0.5 py27_0
pudb 2015.4.1 py 1.4.26 py2cairo 1.10.0 py27_2
pycairo 1.10.0 py27_0
pycuda 2014.1 pydicom 0.9.9 pyface 4.4.0 py27_0
pyflakes 1.0.0 py27_0
pygments 2.0.2 py27_0
pygraphviz 1.2 pyparsing 2.0.3 py27_0
pyqt 5.6.0 py27_0
pysurfer 0.5 pytest 2.7.0 python 2.7.11 0
python-dateutil 2.5.0 py27_0
pytools 2014.3.5 pytz 2016.1 py27_0
pyyaml 3.11 py27_1
pyzmq 14.7.0 py27_1
qt 5.6.0 1
qtconsole 4.2.1 py27_1
readline 6.2 2
requests 2.9.1 py27_0
rope 0.9.4 py27_1
scandir 1.3 py27_0 conda-forge scandir 1.3 scikit-learn 0.17.1 np111py27_1
scikits.cuda 0.42 scipy 0.18.1 np111py27_0
setuptools 20.3 py27_0
simplegeneric 0.8.1 py27_0
singledispatch 3.4.0.3 py27_0
sip 4.18 py27_0
six 1.10.0 py27_0
snowballstemmer 1.2.0 py27_0
sphinx 1.3.1 py27_0
sphinx_rtd_theme 0.1.7 py27_0
spyder 2.3.7 py27_1
sqlite 3.9.2 0
ssl_match_hostname 3.4.0.2 py27_0
statsmodels 0.6.1 np111py27_1
system 5.8 2
terminado 0.5 py27_1
tk 8.5.18 0
tornado 4.3 py27_0
traitlets 4.3.1 py27_0
traits 4.5.0 py27_0
traitsui 4.4.0 py27_0
urwid 1.3.1 vtk 5.10.1 py27_1
wcwidth 0.1.7 py27_0
werkzeug 0.10.4 py27_0
wheel 0.29.0 py27_0
Whoosh 2.7.4 whoosh 2.7.4 py27_0
winpdb 1.3.6 yaml 0.1.6 0
zeromq 4.1.3 0
zlib 1.2.8 0

[parente]

The list shows that notebook 4.0.6 is installed in that environment not 4.2. You can upgrade your notebook or use the legacy install steps for cms.

[jmontoyam]

Thank you very much!, I run conda update notebook as you suggested me and now everything works!. Please excuse me my beginner question!, when I run jupyter notebook --version it returns 4.2.1, therefore I supposed that my notebook version was 4.2.1, I didn't know that notebook and jupyter were 2 different packages, please excuse me my beginner confusion!.

Once again, thank you very much for all your help, and for your patience! :-).

[parente]

You're welcome.