justin13601 / ACES

ACES: Automatic Cohort Extraction System for Event-Streams
https://eventstreamaces.readthedocs.io/en/latest/
MIT License
13 stars 0 forks source link

Query doctests #19

Closed justin13601 closed 2 months ago

justin13601 commented 2 months ago

Summary by CodeRabbit

coderabbitai[bot] commented 2 months ago

Walkthrough

The recent updates have refined data access and processing, enhancing robustness and streamlining operations. These changes aim to improve error handling, simplify configuration logic, and optimize data manipulation for better system performance and resilience.

Changes

File Path Change Summary
src/esgpt_task_querying/main.py Accesses 'start' key in window dictionaries for start times, improving data retrieval within the function.
src/esgpt_task_querying/query.py
src/esgpt_task_querying/config.py
Removed return statement in summarize_temporal_window function, now returns modified DataFrame with filled null values and reordered columns. Modified how window information is accessed in build_tree_from_config for enhanced robustness using .get() method.
sample_configs/inhospital_mortality.yaml Removed specific fields from window configurations, simplifying and optimizing logic for better clarity.
src/esgpt_task_querying/event_predicates.py Restructured data processing, adjusted aggregation logic, and modified handling of event and measurement data in generate_predicate_columns function.

Poem

🐇💻✨
In the code's intricate dance, a rabbit does play,
Weaving changes with care in the lines of the day.
Data flows refined, like a river so sleek,
Resilient and nimble, with each gentle tweak.
Celebrate the craft, as the rabbit codes with glee!


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justin13601 commented 2 months ago

@coderabbitai review

justin13601 commented 2 months ago

Addresses many checkboxes in #3