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jvkersch / tmtools

Python bindings for the TM-align algorithm and code for protein structure comparison developed by Zhang et al.
GNU General Public License v3.0
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Expose resulting sequence alignment from TMAlign #33

Open cvigilv opened 6 days ago

cvigilv commented 6 days ago

Hi! Thanks for the awesome work. Would like to know if you could possibly add the sequence alignment generated from the structural alignment as an output to the TMResult object. That way we can use that information to compute RMSD with external methods or other downstream tasks.

jvkersch commented 5 days ago

This would be good to have, I agree. I have to pour over the TMalign code for a bit to see how difficult this would be. In the meantime, if you have an idea of how to achieve this, let me know.

cvigilv commented 5 days ago

Great! Will give a look at the code and see if I can give you a help. Thanks in advance!