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jyaacoub / MutDTA

Improving the precision oncology pipeline by providing binding affinity purtubations predictions on a pirori identified cancer driver genes.
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BioPython failed to get CA for residue 259 of PDB-5aa9 #2

Closed jyaacoub closed 1 year ago

jyaacoub commented 1 year ago

BioPython is being used by contact map generation.

jyaacoub commented 1 year ago

This issue was resolved in https://github.com/jyaacoub/MutDTA/commit/cf53d737f30982cf555fa63b95380ba631051a38

by writing my own parser to only extract the atoms with "CA" names and their coords. This has the added benefit of improved performance.