Refactor code to use `ProDy` parser to resolve mismatching sequences.

jyaacoub / MutDTA

Improving the precision oncology pipeline by providing binding affinity purtubations predictions on a pirori identified cancer driver genes.

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Closed jyaacoub closed 1 year ago

jyaacoub commented 1 year ago

Some additional issues with mismatching sequence between ProDy parser and my own parser
- Root cause is due to nonstandard HETATMs being parsed with ProDy but not with my parser

Example with PDB 5swg: Pasted image 20230907151530