jyyulab / SJARACNe

Scalable Tool for Gene Network Reverse Engineering
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Run with error #38

Open YiyuCh opened 2 years ago

YiyuCh commented 2 years ago

Hi, I have installed all the requirements and run SJAR in Ubuntu 20.04. environment: python 3.7.4, Node.js v17.9.0 However, i've been having some issues. The ERROR information is listed below: 【subprocess.CalledProcessError: Command '['cwltool', '--parallel', '--outdir', './test_data/outputs/cwl/cwltool/SJARACNE_out.final', '/home/yiyu/software/anaconda3/envs/py374/lib/python3.7/site-packages/SJARACNe-0.2.1-py3.7.egg/SJARACNe/cwl/sjaracne_workflow.cwl', 'test_data/outputs/cwl/cwltool/SJARACNE_out.final/sjaracne_workflow.yml']' returned non-zero exit status 1.】 Please help me to solve the problem. Thank you!

adamdingliang commented 2 years ago

We would more specific information about the errors.

BTW, we are developing a Dockerfile to simplify the installation process.