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jzhoulab / ddsm

Dirichlet Diffusion Score Model for Biological Sequence Generation.
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memmap conversion issue #10

Closed zihaoli0629 closed 2 months ago

zihaoli0629 commented 2 months ago

Hi Pavel,

I installed selene-sdk==0.5.3 and downloaded the data as guided. However, when I run the file make_genome_memmap.py, the following error pops out:

ModuleNotFoundError: No module named 'selene_utils'

I realize it comes from from selene_utils import MemmapGenome, so I tried to independently install selene_utils package. But I didn't find it. Could you provide any guidance on what was going on?

zihaoli0629 commented 2 months ago

I found that selene_utils is in the external directory. Seems that only need to change the sys.path.append a bit.