se does not generate the same alignment as TM-align

kad-ecoli / TMalign

This repo is outdated. Please use https://github.com/pylelab/USalign instead

https://github.com/pylelab/USalign

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Closed kad-ecoli closed 5 years ago

kad-ecoli commented 6 years ago

se calculated TM-score and RMSD is not identical to the one directly calculated by TM-align. Check what is going on.

kad-ecoli commented 5 years ago

PDB coordinate only have three digits, which is less precise than double precision number used internally by TM-align.