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kailaix / AdFem.jl

Innovative, efficient, and computational-graph-based finite element simulator for inverse modeling
MIT License
80 stars 17 forks source link

Problem with build in Julia 1.8.5 #21

Open itk22 opened 1 year ago

itk22 commented 1 year ago

Hello, I am trying to build the package in my Julia environment. I have used the following commands:

using Pkg 
Pkg.add(PackageSpec(url="https://github.com/kailaix/AdFem.jl", rev="master"))

However, I get build errors for the following packages: ✗ SpecialFunctions ✗ HDF5 ✗ MAT ✗ ADCME ✗ AdFem

Is there any chance you could help with this? The package looks like a great choice for the project I am working on currently and I would love to be able to use it. For reference, here is the output from running versioninfo() on my system:

Julia Version 1.8.5
Commit 17cfb8e65ea (2023-01-08 06:45 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
  CPU: 8 × 11th Gen Intel(R) Core(TM) i7-1185G7 @ 3.00GHz
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, tigerlake)
  Threads: 1 on 8 virtual cores
itk22 commented 1 year ago

I have now tried to do the same thing on Julia 1.4.1 and I am getting the following errors:

signal (6): Aborted
│ in expression starting at /home/igork/.julia/packages/ADCME/94vEM/deps/build.jl:70
│ gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
│ abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
│ jl_intref at /buildworker/worker/package_linux64/build/src/typemap.c:194 [inlined]
│ mtcache_hash_lookup at /buildworker/worker/package_linux64/build/src/typemap.c:255 [inlined]
│ jl_typemap_intersection_visitor at /buildworker/worker/package_linux64/build/src/typemap.c:545
│ jl_method_table_insert at /buildworker/worker/package_linux64/build/src/gf.c:1691
│ jl_insert_methods at /buildworker/worker/package_linux64/build/src/dump.c:2267 [inlined]
│ _jl_restore_incremental at /buildworker/worker/package_linux64/build/src/dump.c:3269
│ jl_restore_incremental at /buildworker/worker/package_linux64/build/src/dump.c:3314
│ _include_from_serialized at ./loading.jl:681
│ _require_from_serialized at ./loading.jl:748
│ _require at ./loading.jl:1039
│ require at ./loading.jl:927
│ require at ./loading.jl:922
│ _jl_invoke at /buildworker/worker/package_linux64/build/src/gf.c:2144 [inlined]
│ jl_apply_generic at /buildworker/worker/package_linux64/build/src/gf.c:2322
│ jl_apply at /buildworker/worker/package_linux64/build/src/julia.h:1700 [inlined]
│ call_require at /buildworker/worker/package_linux64/build/src/toplevel.c:399 [inlined]
│ eval_import_path at /buildworker/worker/package_linux64/build/src/toplevel.c:436
│ jl_toplevel_eval_flex at /buildworker/worker/package_linux64/build/src/toplevel.c:656
│ jl_parse_eval_all at /buildworker/worker/package_linux64/build/src/ast.c:872
│ jl_load at /buildworker/worker/package_linux64/build/src/toplevel.c:872
│ include at ./client.jl:439
│ _jl_invoke at /buildworker/worker/package_linux64/build/src/gf.c:2144 [inlined]
│ jl_apply_generic at /buildworker/worker/package_linux64/build/src/gf.c:2322
│ jl_apply at /buildworker/worker/package_linux64/build/src/julia.h:1700 [inlined]
│ do_call at /buildworker/worker/package_linux64/build/src/interpreter.c:369
│ eval_value at /buildworker/worker/package_linux64/build/src/interpreter.c:458
│ eval_stmt_value at /buildworker/worker/package_linux64/build/src/interpreter.c:409 [inlined]
│ eval_body at /buildworker/worker/package_linux64/build/src/interpreter.c:817
│ jl_interpret_toplevel_thunk at /buildworker/worker/package_linux64/build/src/interpreter.c:911
│ jl_toplevel_eval_flex at /buildworker/worker/package_linux64/build/src/toplevel.c:814
│ jl_toplevel_eval_flex at /buildworker/worker/package_linux64/build/src/toplevel.c:764
│ jl_toplevel_eval_in at /buildworker/worker/package_linux64/build/src/toplevel.c:843
│ eval at ./boot.jl:331
│ _jl_invoke at /buildworker/worker/package_linux64/build/src/gf.c:2144 [inlined]
│ jl_apply_generic at /buildworker/worker/package_linux64/build/src/gf.c:2322
│ exec_options at ./client.jl:264
│ _start at ./client.jl:484
│ jfptr__start_2075.clone_1 at /home/igork/julia-1.4.1/lib/julia/sys.so (unknown line)
│ _jl_invoke at /buildworker/worker/package_linux64/build/src/gf.c:2144 [inlined]
│ jl_apply_generic at /buildworker/worker/package_linux64/build/src/gf.c:2322
│ jl_apply at /buildworker/worker/package_linux64/build/ui/../src/julia.h:1700 [inlined]
│ true_main at /buildworker/worker/package_linux64/build/ui/repl.c:96
│ main at /buildworker/worker/package_linux64/build/ui/repl.c:217
│ __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
│ _start at /home/igork/julia-1.4.1/bin/julia (unknown line)
│ Allocations: 17883636 (Pool: 17879997; Big: 3639); GC: 20
│
│ Full log at /home/igork/.julia/packages/ADCME/94vEM/deps/build.log