error message when trying to plot(fit)

kaitlyngaynor / gorongosa-mesocarnivores

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error message when trying to plot(fit) #60

Closed kaitlyngaynor closed 4 years ago

kaitlyngaynor commented 4 years ago

regarding the error message when trying to plot(fit):

I removed maxOrder = 2 from the data function and it didn't fix it
I added 5 '~0's to the occFormulas list to try to give it the 15 formulas it wanted, and that threw an error saying that: 10 formulas are required in stateformulas list

I might leave it here for the night but wanted to note what I've tried

Originally posted by @klg-2016 in https://github.com/kaitlyngaynor/gorongosa-mesocarnivores/issues/59#issuecomment-665369848

kaitlyngaynor commented 4 years ago

This may just be a bug in the code. At any rate, I'm unconvinced that we actually need to use the plot function on the model object itself—we can just make plots of our own, based on whatever it is that we are interested in seeing (ex. covariate effects)

kaitlyngaynor commented 4 years ago

For example, if we do that, we can easily make figures like this one (I have lots of code for various occupancy model figures from the Animal Conservation paper):

klg-2016 commented 4 years ago

Sounds good to me!