The analysis about non-single cell sequencing

kaizhang / SnapATAC2

Single-cell epigenomics analysis tools

https://kzhang.org/SnapATAC2/

197 stars 20 forks source link

The analysis about non-single cell sequencing #313

Open allanlinzhang opened 2 weeks ago

allanlinzhang commented 2 weeks ago

I have non-single cell ATAC-seq data, can I use SnapATAC2 to analyse it?

kaizhang commented 10 hours ago

SnapATAC2 is designed for performing exploratory analysis on scATAC-seq data. There are many mature pipelines for bulk ATAC-seq analysis. For example: https://nf-co.re/atacseq/2.1.2/