3D plotting didn't work on the server so I ran it on my work desktop. That desktop has Windows 7 which is not compatible with Python 3.9 that we used on the server. So I downgraded to Python 3.7 (it seems I could have used 3.8). I now tested the whole pipeline with Python 3.7:
downloaded everything on the server,
ran everything but plotting sources and knitting the report on the server,
ran plotting sources and knitting the report on the server.
There is no important difference in the report. The only slight one is in the ERP image but it is just a few-pixels shift.
The only problem is that we already mentioned 3.9 in the manuscript. But I don't think that is really a problem.
3D plotting didn't work on the server so I ran it on my work desktop. That desktop has Windows 7 which is not compatible with Python 3.9 that we used on the server. So I downgraded to Python 3.7 (it seems I could have used 3.8). I now tested the whole pipeline with Python 3.7:
There is no important difference in the report. The only slight one is in the ERP image but it is just a few-pixels shift.
The only problem is that we already mentioned 3.9 in the manuscript. But I don't think that is really a problem.