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kalininalab / alphafold_non_docker

AlphaFold2 non-docker setup
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jaxlib==0.1.69+cuda111 still here and generating errors #52

Closed ocstx closed 2 years ago

ocstx commented 2 years ago

this line: pip install --upgrade jax==0.2.14 jaxlib==0.1.69+cuda111 -f https://storage.googleapis.com/jax-releases/jax_releases.html generates an error this issue was solved here: https://github.com/deepmind/alphafold/issues/510 with this: pip install --upgrade jax==0.2.14 jaxlib==0.1.69+cuda111 -f https://storage.googleapis.com/jax-releases/jax_cuda_releases.html

Shuld not be changed?

sanjaysrikakulam commented 2 years ago

Sorry for the delay. It's fixed now via a pull request from @SarahBeecroft

dahaigui commented 1 year ago

I tried pip install --upgrade jax==0.2.14 jaxlib==0.1.69+cuda111 -f https://storage.googleapis.com/jax-releases/jax_cuda_releases.html, but it doesn't work, There is still an error reported as “AttributeError: module 'jaxlib.xla_extension' has no attribute 'CompiledFunction'”