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kango2 / ausarg

This repository contains information and code for AusARG genome assemblies.
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Bassiana Assembly Juicer + 3D DNA + AutoHiC #15

Closed kiratalreja3 closed 1 year ago

kiratalreja3 commented 1 year ago

Juicer running on Bassiana HifiASM assembly now.

kiratalreja3 commented 1 year ago

Juicer done, 3D-DNA running now

kiratalreja3 commented 1 year ago
Screenshot 2023-09-21 at 12 12 15 pm

0th iter

kiratalreja3 commented 1 year ago
Screenshot 2023-09-21 at 2 30 57 pm

1st iter

kiratalreja3 commented 1 year ago
Screenshot 2023-09-22 at 9 26 17 am

final assembly

kiratalreja3 commented 1 year ago

Running AutoHiC on this assembly now.

kiratalreja3 commented 1 year ago

AutoHiC completed, generating FASTA

kiratalreja3 commented 1 year ago

Unsuccessful results, resorting to YAHS