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kapsakcj / nanoporeWorkflow

:dna: Shell scripts for working with bacterial isolate Nanopore sequence data on CDC servers
MIT License
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ensure filtlong check actually works #31

Closed kapsakcj closed 3 years ago

kapsakcj commented 4 years ago

Don't want to accidentally lose all.fastq.gz if the workflow-after-gpu-basecalling.sh script is run a second time on a directory.

Noticed this with N20169-20-005 bc12. all.fastq.gz suspiciously had exactly 600Mb of data

kapsakcj commented 3 years ago

It works. Tested multiple times on different data sets. Closing