Closed kapsakcj closed 4 years ago
Currently, after a basecalling job finishes via qsub, the guppy-gpu.log and guppy-gpu.err go into the PWD and should be moved into the user-specified $OUTDIR.
This would help keep things tidy
files should be moved into $OUTDIR/log/guppy-gpu.log and $OUTDIR/log/guppy-gpu.err after basecalling finishes
done in https://github.com/lskatz/nanoporeWorkflow/commit/9b99a8e54bd4924ec6d9bc46e2e51659f4eac7d5
Currently, after a basecalling job finishes via qsub, the guppy-gpu.log and guppy-gpu.err go into the PWD and should be moved into the user-specified $OUTDIR.
This would help keep things tidy