karel-brinda / Phylign

Alignment against all pre-2019 bacteria on laptops within a few hours (former MOF-Search)
http://brinda.eu/mof
Other
25 stars 4 forks source link

COBS decompression dir disappeared from `config.yaml` #207

Closed karel-brinda closed 10 months ago

leoisl commented 1 year ago

I can still see it there: https://github.com/karel-brinda/mof-search/blob/5b6d0b2c0fda7c8f0e8645efbcbdc750f47631a3/config.yaml#L113

it is commented out (i.e. undefined) since several commits ago. Would you like it to be explicitly defined?

karel-brinda commented 1 year ago

Yes, please. It's because of conf diffs and knowing which parameters exist (as this is changing).

karel-brinda commented 1 year ago

@leoisl This should be easy to fix, right?

leoisl commented 1 year ago

Yes, I will do it soon, prioritising RAM measurements for the moment

karel-brinda commented 10 months ago

No longer an issue as COBS files are now by default decompressed in memory.