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karel-brinda
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ococo
Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.
https://arxiv.org/abs/1712.01146
MIT License
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Ococo 0.1.2
#19
Closed
karel-brinda
closed
8 years ago
karel-brinda
commented
8 years ago
Major improvements:
Replace Boost by getopt
Don't use CMake
Add a manpage
Minor improvements
Improve help message
Add CPU measurements
Polish code (remove old debugging code, remove unused gtest, add clang-format configuration file, etc.)
Add hidden option for logging updates
Change default majority constant from 0.60 to 0.51
@closes #9
Major improvements:
Minor improvements
@closes #9