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karel-brinda / rnftools

RNF framework for NGS: simulation of reads, evaluation of mappers, conversion of RNF-compliant data.
http://karel-brinda.github.io/rnftools
MIT License
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Wrong RNF names in simulations using DwgSim #40

Open karel-brinda opened 8 years ago

karel-brinda commented 8 years ago

2nd blocks are wrong (they are the same as first blocks):

__000001__(01,01,R,001362565,000000000),(01,01,R,001362565,000000000)__[dwgsim,reads-in-tuple:2]    83  gi|448814763|ref|NC_000962.3|   1362565 42  100M    =   1362134 -531    CTAGCAGTATGCGCAGTGTCGTGGATTTGCCCGCGCCGTTGGGGCCGAGGAAGCCGTGCACTTCGCCCTCGCGCACCGTGAGGTCGAGCCCGTCGAGCGC    23232121023251/42233.227122534422412252/112122231.032332425252/203/2203221161021523.3223132223233302    AS:i:-9 XN:i:0  XM:i:3  XO:i:0  XG:i:0  NM:i:3  MD:Z:7G8G8C74   YS:i:-3 YT:Z:CP