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karel-brinda / rnftools

RNF framework for NGS: simulation of reads, evaluation of mappers, conversion of RNF-compliant data.
http://karel-brinda.github.io/rnftools
MIT License
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Dwgsim - error when 0 simulated reads #53

Open karel-brinda opened 8 years ago

karel-brinda commented 8 years ago 
"/Users/karel/.smbl/bin/dwgsim" -1 100 -2 0 -z 1 -y 0 -N 0 -e 0 -E 0.02 -r 0 -R 0.15 -X 0.3 "../Bacteria/Salmonella_enterica_serovar_Weltevreden_2007_60_3289_1_uid178014/NT_187099.fna" "simulation_bacteria/4116/dwgsim_files.pe.4116" > /dev/null
Error: command line option -N was out of range

Solution: When is coverage too low and number of reads is computed as 0, change it to 1.