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karinlag
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Bifrost
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202207 v2
#28
karinlag
closed
2 years ago
0
202207 v2
#27
karinlag
closed
2 years ago
0
Include contig length cutoff for spades
#26
karinlag
closed
5 years ago
1
Incorporate Roary as a module
#25
karinlag
opened
5 years ago
1
Change R1/R2 in the collate process
#24
karinlag
closed
5 years ago
1
Add java opts for pilon
#23
karinlag
closed
5 years ago
1
Forgotten preCmd in several programs
#22
karinlag
closed
5 years ago
1
Fix trim output, and add copy as params
#21
karinlag
closed
5 years ago
1
Fix data flow for asm
#20
karinlag
opened
6 years ago
0
Some strange output in MLST summary report
#19
solveigmo
opened
6 years ago
0
test
#18
karinlag
closed
6 years ago
0
0.2.1 - fix config files to enable running on abel
#17
karinlag
closed
6 years ago
0
Fix version control numbers in output
#16
karinlag
closed
6 years ago
1
Fix documentation for v02
#15
karinlag
closed
5 years ago
1
Make data structure for bifrost
#14
karinlag
opened
6 years ago
0
Fix config files, incorporate conda
#13
karinlag
closed
6 years ago
1
Ariba: enable use of existing/already downloaded dbs
#12
karinlag
opened
6 years ago
0
Use conda for packages
#11
karinlag
closed
6 years ago
1
Ariba fix
#10
karinlag
closed
6 years ago
0
QC pipeline
#9
karinlag
opened
6 years ago
0
Asm module
#8
karinlag
closed
6 years ago
0
Incorporate parSNP into pipeline
#7
hkaspersen
opened
6 years ago
0
Change assembler to unicycler
#6
karinlag
closed
6 years ago
0
Modify config, test run on local
#5
karinlag
closed
7 years ago
1
Modify config, test run on abel
#4
karinlag
closed
6 years ago
1
Separate asm and special gene finding config files
#3
karinlag
closed
7 years ago
0
Review current NF file
#2
karinlag
closed
7 years ago
0
Make a list of available core SNP tree software
#1
karinlag
closed
6 years ago
0