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kassambara / fastqcr

fastqcr: Quality Control of Sequencing Data
http://www.sthda.com/english/rpkgs/fastqcr
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Column `Length` can't be converted from numeric to character #15

Open AnnabelleVH opened 5 years ago

AnnabelleVH commented 5 years ago

Hi, I would like to plot FastQC data of multiple samples, but I encounter a problem with the qc_read_collection function (while the qc_read and qc_report functions work fine). Do you have any idea what is wrong?

Thanks for your help! Annabelle

qc.files <- list.files(qc.dir, full.names = TRUE)
samples<-(c("ERR158720_1_700kreads_HiSeq2k","SRR5909287_1_849kreads_MiSeq","SRR7748059_1_800kreads_HiSeq4k"))
qc <- qc_read_collection(qc.files, sample_names = samples)

Reading: /path-to/ERR158720_1_700kreads_HiSeq2k_fastqc.zip Reading: /path-to/SRR5909287_1_849kreads_MiSeq_fastqc.zip Reading: /path-to/SRR7748059_1_800kreads_HiSeq4k_fastqc.zip Erreur : Column Length can't be converted from numeric to character