kassambara / survminer

Survival Analysis and Visualization
https://rpkgs.datanovia.com/survminer/
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survminer warning #658

Closed Gauger closed 2 weeks ago

Gauger commented 4 months ago

Warning: There was 1 warning in mutate(). ℹ In argument: survtable = purrr::map2(...). Caused by warning: ! select_() was deprecated in dplyr 0.7.0. ℹ Please use select() instead. ℹ The deprecated feature was likely used in the survminer package.

─ Session info ─────────────────────────────────────────────────────────────────────────────────────────────
 setting  value
 version  R version 4.3.1 (2023-06-16 ucrt)
 os       Windows 10 x64 (build 19045)
 system   x86_64, mingw32
 ui       RStudio
 language (EN)
 collate  German_Germany.utf8
 ctype    German_Germany.utf8
 tz       Europe/Berlin
 date     2024-07-09
 rstudio  2024.04.2+764 Chocolate Cosmos (desktop)
 pandoc   3.1.11 @ C:/Program Files/RStudio/resources/app/bin/quarto/bin/tools/ (via rmarkdown)

─ Packages ─────────────────────────────────────────────────────────────────────────────────────────────────
 package           * version  date (UTC) lib source
 abind               1.4-5    2016-07-21 [1] CRAN (R 4.3.0)
 askpass             1.2.0    2023-09-03 [1] CRAN (R 4.3.3)
 assertthat          0.2.1    2019-03-21 [1] CRAN (R 4.3.1)
 backports           1.4.1    2021-12-13 [1] CRAN (R 4.3.0)
 boot              * 1.3-28.1 2022-11-22 [1] CRAN (R 4.3.1)
 broom               1.0.5    2023-06-09 [1] CRAN (R 4.3.1)
 cachem              1.0.8    2023-05-01 [1] CRAN (R 4.3.1)
 callr               3.7.3    2022-11-02 [1] CRAN (R 4.3.1)
 car                 3.1-2    2023-03-30 [1] CRAN (R 4.3.1)
 carData             3.0-5    2022-01-06 [1] CRAN (R 4.3.1)
 cli                 3.6.1    2023-03-23 [1] CRAN (R 4.3.1)
 colorspace          2.1-0    2023-01-23 [1] CRAN (R 4.3.1)
 commonmark          1.9.0    2023-03-17 [1] CRAN (R 4.3.1)
 crayon              1.5.2    2022-09-29 [1] CRAN (R 4.3.1)
 crul                1.4.0    2023-05-17 [1] CRAN (R 4.3.1)
 curl                5.0.1    2023-06-07 [1] CRAN (R 4.3.1)
 data.table          1.15.2   2024-02-29 [1] CRAN (R 4.3.3)
 devtools            2.4.5    2022-10-11 [1] CRAN (R 4.3.1)
 digest              0.6.33   2023-07-07 [1] CRAN (R 4.3.1)
 dplyr             * 1.1.2    2023-04-20 [1] CRAN (R 4.3.1)
 ellipsis            0.3.2    2021-04-29 [1] CRAN (R 4.3.1)
 evaluate            0.21     2023-05-05 [1] CRAN (R 4.3.1)
 fansi               1.0.6    2023-12-08 [1] CRAN (R 4.3.3)
 farver              2.1.1    2022-07-06 [1] CRAN (R 4.3.1)
 fastmap             1.1.1    2023-02-24 [1] CRAN (R 4.3.1)
 flextable         * 0.9.2    2023-06-18 [1] CRAN (R 4.3.1)
 fontBitstreamVera   0.1.1    2017-02-01 [1] CRAN (R 4.3.0)
 fontLiberation      0.1.0    2016-10-15 [1] CRAN (R 4.3.0)
 fontquiver          0.2.1    2017-02-01 [1] CRAN (R 4.3.1)
 fs                  1.6.2    2023-04-25 [1] CRAN (R 4.3.1)
 gdtools             0.3.3    2023-03-27 [1] CRAN (R 4.3.1)
 generics            0.1.3    2022-07-05 [1] CRAN (R 4.3.1)
 gfonts              0.2.0    2023-01-08 [1] CRAN (R 4.3.1)
 ggplot2           * 3.4.2    2023-04-03 [1] CRAN (R 4.3.1)
 ggpubr            * 0.6.0    2023-02-10 [1] CRAN (R 4.3.1)
 ggsignif            0.6.4    2022-10-13 [1] CRAN (R 4.3.1)
 ggtext              0.1.2    2022-09-16 [1] CRAN (R 4.3.1)
 glue                1.6.2    2022-02-24 [1] CRAN (R 4.3.1)
 gridExtra           2.3      2017-09-09 [1] CRAN (R 4.3.1)
 gridtext            0.1.5    2022-09-16 [1] CRAN (R 4.3.1)
 gtable              0.3.3    2023-03-21 [1] CRAN (R 4.3.1)
 htmltools           0.5.5    2023-03-23 [1] CRAN (R 4.3.1)
 htmlwidgets         1.6.2    2023-03-17 [1] CRAN (R 4.3.1)
 httpcode            0.3.0    2020-04-10 [1] CRAN (R 4.3.1)
 httpuv              1.6.11   2023-05-11 [1] CRAN (R 4.3.1)
 jsonlite            1.8.8    2023-12-04 [1] CRAN (R 4.3.3)
 km.ci               0.5-6    2022-04-06 [1] CRAN (R 4.3.1)
 KMsurv              0.1-5    2012-12-03 [1] CRAN (R 4.3.0)
 knitr               1.43     2023-05-25 [1] CRAN (R 4.3.1)
 labeling            0.4.2    2020-10-20 [1] CRAN (R 4.3.0)
 later               1.3.1    2023-05-02 [1] CRAN (R 4.3.1)
 lattice             0.21-8   2023-04-05 [1] CRAN (R 4.3.1)
 lifecycle           1.0.4    2023-11-07 [1] CRAN (R 4.3.3)
 magrittr            2.0.3    2022-03-30 [1] CRAN (R 4.3.1)
 MAIC              * 0.4.0    2023-08-08 [1] Github (roche/MAIC@4584524)
 markdown            1.7      2023-05-16 [1] CRAN (R 4.3.1)
 Matrix              1.6-0    2023-07-08 [1] CRAN (R 4.3.1)
 memoise             2.0.1    2021-11-26 [1] CRAN (R 4.3.1)
 mime                0.12     2021-09-28 [1] CRAN (R 4.3.0)
 miniUI              0.1.1.1  2018-05-18 [1] CRAN (R 4.3.1)
 munsell             0.5.0    2018-06-12 [1] CRAN (R 4.3.1)
 officer           * 0.6.2    2023-03-28 [1] CRAN (R 4.3.1)
 openssl             2.1.1    2023-09-25 [1] CRAN (R 4.3.3)
 pillar              1.9.0    2023-03-22 [1] CRAN (R 4.3.1)
 pkgbuild            1.4.2    2023-06-26 [1] CRAN (R 4.3.1)
 pkgconfig           2.0.3    2019-09-22 [1] CRAN (R 4.3.1)
 pkgload             1.3.2.1  2023-07-08 [1] CRAN (R 4.3.1)
 prettyunits         1.1.1    2020-01-24 [1] CRAN (R 4.3.1)
 processx            3.8.2    2023-06-30 [1] CRAN (R 4.3.1)
 profvis             0.3.8    2023-05-02 [1] CRAN (R 4.3.1)
 promises            1.2.0.1  2021-02-11 [1] CRAN (R 4.3.1)
 ps                  1.7.5    2023-04-18 [1] CRAN (R 4.3.1)
 purrr               1.0.1    2023-01-10 [1] CRAN (R 4.3.1)
 R6                  2.5.1    2021-08-19 [1] CRAN (R 4.3.1)
 ragg                1.2.5    2023-01-12 [1] CRAN (R 4.3.1)
 Rcpp                1.0.11   2023-07-06 [1] CRAN (R 4.3.1)
 remotes             2.4.2.1  2023-07-18 [1] CRAN (R 4.3.1)
 rlang               1.1.1    2023-04-28 [1] CRAN (R 4.3.1)
 rmarkdown           2.23     2023-07-01 [1] CRAN (R 4.3.1)
 rstatix             0.7.2    2023-02-01 [1] CRAN (R 4.3.1)
 rstudioapi          0.15.0   2023-07-07 [1] CRAN (R 4.3.1)
 sandwich          * 3.1-0    2023-12-11 [1] CRAN (R 4.3.3)
 scales              1.2.1    2022-08-20 [1] CRAN (R 4.3.1)
 sessioninfo         1.2.2    2021-12-06 [1] CRAN (R 4.3.1)
 shiny               1.7.4.1  2023-07-06 [1] CRAN (R 4.3.1)
 stringi             1.7.12   2023-01-11 [1] CRAN (R 4.3.0)
 stringr             1.5.1    2023-11-14 [1] CRAN (R 4.3.3)
 survival          * 3.5-5    2023-03-12 [1] CRAN (R 4.3.1)
 survminer         * 0.4.9    2021-03-09 [1] CRAN (R 4.3.1)
 survMisc            0.5.6    2022-04-07 [1] CRAN (R 4.3.1)
 systemfonts         1.0.4    2022-02-11 [1] CRAN (R 4.3.1)
 textshaping         0.3.6    2021-10-13 [1] CRAN (R 4.3.1)
 tibble              3.2.1    2023-03-20 [1] CRAN (R 4.3.1)
 tidyr             * 1.3.0    2023-01-24 [1] CRAN (R 4.3.1)
 tidyselect          1.2.0    2022-10-10 [1] CRAN (R 4.3.1)
 urlchecker          1.0.1    2021-11-30 [1] CRAN (R 4.3.1)
 usethis             2.2.2    2023-07-06 [1] CRAN (R 4.3.1)
 utf8                1.2.4    2023-10-22 [1] CRAN (R 4.3.3)
 uuid                1.1-0    2022-04-19 [1] CRAN (R 4.3.0)
 vctrs               0.6.3    2023-06-14 [1] CRAN (R 4.3.1)
 wakefield         * 0.3.6    2020-09-13 [1] CRAN (R 4.3.3)
 withr               3.0.0    2024-01-16 [1] CRAN (R 4.3.3)
 xfun                0.39     2023-04-20 [1] CRAN (R 4.3.1)
 xml2                1.3.6    2023-12-04 [1] CRAN (R 4.3.3)
 xtable              1.8-4    2019-04-21 [1] CRAN (R 4.3.1)
 zip                 2.3.0    2023-04-17 [1] CRAN (R 4.3.1)
 zoo                 1.8-12   2023-04-13 [1] CRAN (R 4.3.1)
kassambara commented 2 weeks ago

fixed in #579 and #665