Speed-up and parallel transform

katerinakazantseva / strainy

Graph-based assembly phasing

Other

65 stars 5 forks source link

Speed-up and parallel transform #40

Closed mikolmogorov closed 1 year ago

mikolmogorov commented 1 year ago

Substantial part of transform is processing each unitig independently, so should be easy to make it run in parallel. This should result into a significant speedup.