Consequences file RNA coordinate off by one.

katholt / RedDog

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Closed prmcadam closed 9 years ago

prmcadam commented 9 years ago

The 'ntInGene' field of the consequences file is +1 what it should be for RNA sequences. The 'SNP' and 'ref' fields appear to be correct.

d-j-e commented 9 years ago

Now fixed in V1beta.1 - ntInGene field now report correct position (only affected non-coding features in forward orientation)