katholt / srst2

Short Read Sequence Typing for Bacterial Pathogens
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Installation error #104

Closed jhaan1027 closed 6 years ago

jhaan1027 commented 6 years ago

Hi, I am pretty new to bioconda environment.

conda install srst2 Fetching package metadata ........... Solving package specifications: ..........

All requested packages already installed.

packages in environment at /home/mdh/sunxx801/.conda/envs/conda_jisun:

# srst2 0.2.0 py27_2 bioconda

and I tried to check the completed version of srst2 with "srst2 --version" I get this error Traceback (most recent call last): File "/home/mdh/sunxx801/.conda/envs/conda_jisun/bin/srst2", line 11, in load_entry_point('srst2==0.2.0', 'console_scripts', 'srst2')() File "/home/mdh/sunxx801/.conda/envs/conda_jisun/lib/python2.7/site-packages/pkg_resources/init.py", line 572, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/home/mdh/sunxx801/.conda/envs/conda_jisun/lib/python2.7/site-packages/pkg_resources/init.py", line 2754, in load_entry_point raise ImportError("Entry point %r not found" % ((group, name),)) ImportError: Entry point ('console_scripts', 'srst2') not found

Any idea how can I solve this problem? Thank you in advance.