Currently we just check for 2.1.0, but I have tested and found it works with the more recent higher versions of bowtie2.
So check_command_version function needs to be modified to allow any versions higher than this FOR BOWTIE2 BUT NOT FOR SAMTOOLS as we need to enforce samtools 0.1.18 and not allow 0.1.19
katholt
commented
9 years ago
Currently we just check for 2.1.0, but I have tested and found it works with the more recent higher versions of bowtie2. So check_command_version function needs to be modified to allow any versions higher than this FOR BOWTIE2 BUT NOT FOR SAMTOOLS as we need to enforce samtools 0.1.18 and not allow 0.1.19