creating srst2 executable

katholt / srst2

Short Read Sequence Typing for Bacterial Pathogens

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creating srst2 executable #82

Open najoshi opened 7 years ago

najoshi commented 7 years ago

I've tried both the pip install and python setup.py ways of installing srst2, and I can't seem to get the "srst2" executable to generate. I get the "slurm_srst2.py" and "getmlst.py" to generate, but not "srst2". Any idea of what I am doing wrong?

najoshi commented 7 years ago

I get these errors when I run "python setup.py build": /usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'entry_points' warnings.warn(msg) /usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'install_requires' warnings.warn(msg)

najoshi commented 7 years ago

Hmm, I got it to work using setuptools instead of distutils.core in setup.py.