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kbase / JobRunner

KBase Job Runner
MIT License
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WIP: WDL vol mount #39

Open scanon opened 4 years ago

scanon commented 4 years ago

This is a proposal for how to support mounts for WDL jobs.

The admin catalog mounts would be used to specify the mounts. It does require a cromwell config that looks for environment variables and adds the mounts based on those.

codecov[bot] commented 4 years ago

Codecov Report

Merging #39 into ee2 will increase coverage by 0.19%. The diff coverage is 100.00%.

Impacted file tree graph

@@            Coverage Diff             @@
##              ee2      #39      +/-   ##
==========================================
+ Coverage   86.78%   86.97%   +0.19%     
==========================================
  Files          10       10              
  Lines         923      937      +14     
==========================================
+ Hits          801      815      +14     
  Misses        122      122
Impacted Files Coverage Δ
JobRunner/JobRunner.py 85.17% <100.00%> (+0.22%) :arrow_up:
JobRunner/SpecialRunner.py 90.24% <100.00%> (+0.63%) :arrow_up:

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