Refactor to run multiple jobs

[bio-boris]

Description of PR purpose/changes

• prepping for batch running throughout the code base, starting with the preflight checks

• the first pass is to make running jobs preflight checks run from a list of jobs.

• Then the second pass is to make the jobs all return a series of docs to save into mongo with a bulk operation.

• Then the next pass is to make them all get submitted to condor with a bulk operation.

• Then the next pass is to make this operation done via a thread.

• Then the next pass is to make sure the retry_multiple is submitting all jobs via this bulk submit.

• Then the next pass is to make sure that batch submits via the bulk submit.

Testing Instructions

• Details for how to test the PR:
• [ ] Tests pass in Github Actions and locally
• [ ] Changes available on CI

Dev Checklist:

• [ ] My code follows the guidelines at https://sites.google.com/truss.works/kbasetruss/data-upload-project/development
• [ ] I have performed a self-review of my own code
• [ ] I have commented my code, particularly in hard-to-understand areas
• [ ] I have made corresponding changes to the documentation
• [ ] My changes generate no new warnings
• [ ] I have added tests that prove my fix is effective or that my feature works
• [ ] New and existing unit tests pass locally with my changes
• [ ] Any dependent changes have been merged and published in downstream modules
• [ ] I have run Black and Flake8 on changed Python Code manually or with git precommit (and the Github Actions build passes)

[lgtm-com[bot]]

This pull request introduces 1 alert when merging f8251ac2f3eb5cde4b0b07080ed3470885b0838e into bd218d67be688a27152bf99e6538cb98ee6654e0 - view on LGTM.com

new alerts:

• 1 for Unused import

[lgtm-com[bot]]

This pull request introduces 1 alert when merging 2fc340c98ee5329601084e23f6666944564f84d6 into bd218d67be688a27152bf99e6538cb98ee6654e0 - view on LGTM.com

new alerts:

• 1 for Unused import